Beyond
the
Helix
Vareom delivers an automated Whole Exome Sequencing pipeline with real-time annotation, interactive variant filtering, and comprehensive genomic insights.
Specialized capabilities for every genomic workload.
From self-managed cloud pipelines to end-to-end analytical services and institutional capability building.
Vareom SaaS
Built for genomic data teams running their own in-house NGS analysis. Vareom SaaS gives you full, self-managed access to the platform, so your team controls every step of the workflow. When you need a second set of eyes, on-demand bioinformatics consulting and technical support are available to keep your pipeline running smoothly.
Vareom Research
A complete, end-to-end NGS data processing solution for researchers who need full visibility into their results. Vareom Research delivers every core output — BAM files, VCFs, variant annotation files, and quality control reports — giving you everything required for in-depth downstream analysis.
Vareom Academy
Structured training for professionals and institutions looking to build real capability in NGS data analysis. Vareom Academy walks learners step by step through the full workflow, from raw data quality control through to variant identification, demystifying the process along the way.
A pipeline that runs itself,
and results you can trust.
Automated end-to-end pipelines
From FASTQ ingestion to annotated VCF, exon CNV analysis, and comprehensive analytical reports — no manual scripting required.
Built-in variant classification
Every call is tagged Pathogenic through Benign using automated ACMG/AMP classification frameworks, shown as clear status badges — never buried in a raw VCF column.
In-browser high-speed analytics
Blazing-fast in-memory variant querying, custom filtering, and dynamic table sorting with zero server latency or data reloading.
Fully reproducible and auditable
Pipeline version, reference genome, and tool versions are pinned and logged. Re-run any analysis from any point in time.
Interactive genomic visualizers
Integrated AXON network visualization, dynamic CNV graphs, and in-browser variant analysis built directly into the platform interface.
Data sovereignty and privacy
Institutional control over your genomic datasets with isolated environment options, on-premise deployment capability, and zero unauthorized data egress.
Four steps from sample to answer.
Read QC and Alignment
Sequence MappingRaw FASTQ reads are aligned to standard reference genomes with optimized speed and coverage sensitivity.
Variant Calling
SNV and InDel DetectionHigh-confidence detection of single nucleotide variants, small insertions, deletions, and exon events.
Variant Annotation
Database IntegrationAutomated annotation with population frequencies, functional consequences, and clinical classifications.
Report Delivery
Diagnostic SummaryStructured analytical summaries and downstream-ready files generated automatically for interpretation.
Every variant, classified and explained.
Your team sees clear pathogenicity badges, exon-level copy ratio graphs, AXON relational clusters, and evidence-based assertions — all in one integrated view.
Engineered exclusively for cloud performance.
We manage, scale, and optimize the entire bioinformatics stack on dedicated cloud compute — eliminating infrastructure overhead while maximizing processing speed and analytical accuracy.
Dedicated Cloud Compute
Pre-provisioned, GPU-accelerated cloud nodes configured specifically for WES read alignment and variant calling algorithms.
Elastic Turnaround
Process single samples in under 35 minutes or scale out automatically to process hundreds of cohort exomes concurrently.
Continuous Database Sync
Always up to date with the latest ClinVar, gnomAD, and reference annotation releases without manual database maintenance.
Accelerate your WES pipeline today.
Join leading research facilities and independent genomic teams who trust Vareom for automated, reproducible whole-exome sequencing analysis.